STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LCOR_07034.1Coproporphyrinogen iii oxidase. (399 aa)    
Predicted Functional Partners:
LCOR_01756.1
Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family.
  
 0.908
LCOR_03369.1
Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX.
  
 
 0.890
LCOR_02868.1
Protein-(Glutamine-n5) release factor-specific.
  
 
 0.752
LCOR_02867.1
Protoporphyrinogen oxidase.
  
 
 0.752
LCOR_02866.1
Protein-(Glutamine-n5) release factor-specific.
  
 
 0.752
LCOR_07548.1
N-adenine-specific dna methyltransferase 1.
  
 
 0.752
LCOR_00039.1
Termination and polyadenylation protein.
   
  
 0.704
LCOR_10790.1
Dihydroxyacetone kinase.
   
    0.652
LCOR_02959.1
Porphobilinogen deaminase.
  
  
 0.632
LCOR_02733.1
Uncharacterized protein.
   
 
 0.626
Your Current Organism:
Lichtheimia corymbifera
NCBI taxonomy Id: 1263082
Other names: L. corymbifera JMRC:FSU:9682, Lichtheimia corymbifera CBS 429.75, Lichtheimia corymbifera FSU 9682, Lichtheimia corymbifera JMRC:FSU:9682
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.