STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LCOR_07500.1Tbc-domain-containing protein. (350 aa)    
Predicted Functional Partners:
LCOR_07501.1
Gtpase activating.
 
     0.783
LCOR_02334.1
Adp-ribosylation factor; Belongs to the small GTPase superfamily. Arf family.
    
 0.672
LCOR_05088.1
Adp-ribosylation factor 2-like; Belongs to the small GTPase superfamily. Arf family.
    
 0.672
LCOR_05986.1
Adp-ribosylation factor; Belongs to the small GTPase superfamily. Arf family.
    
 0.672
LCOR_06317.1
Adp-ribosylation factor-like protein 5a; Belongs to the small GTPase superfamily. Arf family.
    
 0.672
LCOR_04003.1
Autophagy protein atg27.
   
 
  0.650
LCOR_05681.1
Sortilin.
    
  0.641
LCOR_06285.1
AP complex subunit beta; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration.
   
 
  0.637
LCOR_05458.1
Adaptor protein complex beta subunit.
   
 
  0.637
LCOR_05281.1
Phosphatase and tensin homolog.
   
 
  0.630
Your Current Organism:
Lichtheimia corymbifera
NCBI taxonomy Id: 1263082
Other names: L. corymbifera JMRC:FSU:9682, Lichtheimia corymbifera CBS 429.75, Lichtheimia corymbifera FSU 9682, Lichtheimia corymbifera JMRC:FSU:9682
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.