STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LCOR_07218.1Sad1 unc domain protein. (998 aa)    
Predicted Functional Partners:
LCOR_04438.1
Duf747-domain-containing protein.
    
   0.864
LCOR_02105.1
Vacuolar atp synthase 16 kDa proteolipidsubunit.
 
   
  0.580
LCOR_09401.1
Protein disulfide-isomerase.
    
   0.463
LCOR_01836.1
Gamma-tubulin complex component 3.
      
 0.436
LCOR_09138.1
SUN domain-containing protein.
    
 
 0.435
LCOR_09538.1
SUN domain-containing protein.
    
 
 0.435
LCOR_11022.1
Spindle pole body-associated protein sad1.
    
 
 0.435
LCOR_11316.1
Glucose-regulated protein; Belongs to the heat shock protein 70 family.
    
 
 0.408
Your Current Organism:
Lichtheimia corymbifera
NCBI taxonomy Id: 1263082
Other names: L. corymbifera JMRC:FSU:9682, Lichtheimia corymbifera CBS 429.75, Lichtheimia corymbifera FSU 9682, Lichtheimia corymbifera JMRC:FSU:9682
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.