STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LCOR_07876.1Cyclin-like protein; Belongs to the cyclin family. (344 aa)    
Predicted Functional Partners:
LCOR_00055.1
Pkinase-domain-containing protein.
    
 0.984
LCOR_07960.1
Ctd kinase subunit gamma protein.
   
 
 0.965
LCOR_11849.1
Protein kinase domain-containing protein.
    
 0.865
LCOR_08365.1
Transcription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene.
    
 0.852
LCOR_02137.1
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.847
LCOR_01014.1
Cyclin c; Belongs to the cyclin family.
     
0.789
LCOR_06920.1
P-tefb associated cyclin t pch1; Belongs to the cyclin family.
  
 
0.780
LCOR_10063.1
Cyclin-like protein; Belongs to the cyclin family.
  
 
0.776
LCOR_02250.1
Nuclear cap-binding protein subunit 1-like.
    
 0.775
LCOR_06536.1
P-tefb associated cyclin t pch1; Belongs to the cyclin family.
  
 
0.775
Your Current Organism:
Lichtheimia corymbifera
NCBI taxonomy Id: 1263082
Other names: L. corymbifera JMRC:FSU:9682, Lichtheimia corymbifera CBS 429.75, Lichtheimia corymbifera FSU 9682, Lichtheimia corymbifera JMRC:FSU:9682
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