STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LCOR_07492.1Dna repair protein pso2. (579 aa)    
Predicted Functional Partners:
LCOR_09964.1
Cleavage and polyadenylation specificity factorsubunit 1.
   
 0.956
LCOR_08621.1
Cleavage polyadenylation specificity factor.
   
 0.946
LCOR_08834.1
Dsb repair complex subunit.
   
 0.912
LCOR_03923.1
Dna ligase 4; Belongs to the ATP-dependent DNA ligase family.
   
 0.896
LCOR_07142.1
Integrator complex subunit 4.
   
 0.892
LCOR_09019.1
Fip1 domain-containing protein.
    
 0.892
LCOR_02778.1
Wd repeat-containing protein 82.
    
 0.886
LCOR_04645.1
Rna polymerase ii subunit a c-terminal domainphosphatase ssu72.
   
 0.874
LCOR_05424.1
Mrna cleavage factor complex component.
    
 0.871
LCOR_10733.1
Double-strand break repair protein mus-23; Belongs to the MRE11/RAD32 family.
  
 0.870
Your Current Organism:
Lichtheimia corymbifera
NCBI taxonomy Id: 1263082
Other names: L. corymbifera JMRC:FSU:9682, Lichtheimia corymbifera CBS 429.75, Lichtheimia corymbifera FSU 9682, Lichtheimia corymbifera JMRC:FSU:9682
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