STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LCOR_07950.1Nitrate transporter. (444 aa)    
Predicted Functional Partners:
LCOR_07953.1
Nitrite reductase.
 
 
 0.921
LCOR_07952.1
Nitrate reductase.
 
 0.920
LCOR_05450.1
Cytochrome b5; Belongs to the cytochrome b5 family.
   
 
 0.868
LCOR_01914.1
Sulfite.
    
 0.854
LCOR_11341.1
Cytochrome c oxidase subunit 2; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. Subunit 2 transfers the electrons from cytochrome c via its binuclear copper A center to the bimetallic center of the catalytic subunit 1.
    
 0.806
LCOR_04408.1
Rhodanese domain-containing protein.
    
 0.705
LCOR_05303.1
Sulfite oxidase-like.
    
 0.692
LCOR_07832.1
Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family.
     
 0.685
LCOR_09966.1
Sulfite oxidase.
   
 0.668
LCOR_05302.1
Sulfite oxidase.
    
 0.663
Your Current Organism:
Lichtheimia corymbifera
NCBI taxonomy Id: 1263082
Other names: L. corymbifera JMRC:FSU:9682, Lichtheimia corymbifera CBS 429.75, Lichtheimia corymbifera FSU 9682, Lichtheimia corymbifera JMRC:FSU:9682
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