STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LCOR_07161.1Vacuolar protein-sorting protein bro1. (1071 aa)    
Predicted Functional Partners:
LCOR_09314.1
Magnesium-dependent phosphatase.
    
 0.893
LCOR_05402.1
Dnaj molecular chaperone protein.
 
      0.880
LCOR_04831.1
Endosomal sorting complex protein.
   
 0.773
LCOR_05219.1
Ph signal transduction protein.
  
  
0.724
LCOR_03322.1
Ph signal transduction protein.
     
0.706
LCOR_08857.1
Related to vps60 involved in vacuolar proteinsorting.
    
 0.700
LCOR_03778.1
Polyubiquitin.
   
 
 0.678
LCOR_07745.1
Polyubiquitin.
   
 
 0.678
LCOR_11150.1
Cysteine proteinase; Belongs to the peptidase C19 family.
   
 
 0.658
LCOR_00770.1
Zn(2)-C6 fungal-type domain-containing protein.
    
 0.639
Your Current Organism:
Lichtheimia corymbifera
NCBI taxonomy Id: 1263082
Other names: L. corymbifera JMRC:FSU:9682, Lichtheimia corymbifera CBS 429.75, Lichtheimia corymbifera FSU 9682, Lichtheimia corymbifera JMRC:FSU:9682
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.