STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LCOR_08304.1Related to mrpl16-mitochondrial ribosomal largesubunit; Belongs to the universal ribosomal protein uL16 family. (210 aa)    
Predicted Functional Partners:
LCOR_01400.1
S15 ns1 rna-binding domain-containing protein; Belongs to the universal ribosomal protein uS15 family.
  
 
 0.998
LCOR_03193.1
Ribosomal protein l15.
  
 0.998
LCOR_03228.1
Rml2p.
 
 0.998
LCOR_04844.1
50s ribosomal protein l3; Belongs to the universal ribosomal protein uL3 family.
  
 0.998
LCOR_05181.1
Uncharacterized protein.
 
 
 0.998
LCOR_07271.1
Candidate mitochondrial 50s ribosomal proteinl22; Belongs to the universal ribosomal protein uL22 family.
  
 0.998
LCOR_11381.1
50s ribosomal protein l13.
  
 0.998
LCOR_03256.1
Mitochondrial 37s ribosomal protein mrp4.
 
 
 0.997
LCOR_04234.1
Mitochondrial 37s ribosomal protein mrp2.
  
 
 0.997
LCOR_05889.1
50s ribosomal protein l4.
 
 0.997
Your Current Organism:
Lichtheimia corymbifera
NCBI taxonomy Id: 1263082
Other names: L. corymbifera JMRC:FSU:9682, Lichtheimia corymbifera CBS 429.75, Lichtheimia corymbifera FSU 9682, Lichtheimia corymbifera JMRC:FSU:9682
Server load: low (26%) [HD]