STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LCOR_08429.1Uncharacterized protein. (395 aa)    
Predicted Functional Partners:
LCOR_01731.1
S-phase kinase-associated protein 1a-likeprotein; Belongs to the SKP1 family.
   
 0.812
LCOR_12310.1
S-phase kinase-associated protein 1a-likeprotein; Belongs to the SKP1 family.
   
 0.812
LCOR_01828.1
Ring-box protein 1.
    
 0.808
LCOR_01611.1
Cullin family protein; Belongs to the cullin family.
    
 0.800
LCOR_08912.1
Cullin-domain-containing protein; Belongs to the cullin family.
    
 0.800
LCOR_10533.1
Nedd8.
    
 0.744
LCOR_03778.1
Polyubiquitin.
    
 0.734
LCOR_07745.1
Polyubiquitin.
    
 0.734
LCOR_01765.1
Ubiquitin-40s ribosomal protein s31 fusionprotein.
    
 0.720
LCOR_01789.1
Elongation factor siii p15; Belongs to the SKP1 family.
    
 0.711
Your Current Organism:
Lichtheimia corymbifera
NCBI taxonomy Id: 1263082
Other names: L. corymbifera JMRC:FSU:9682, Lichtheimia corymbifera CBS 429.75, Lichtheimia corymbifera FSU 9682, Lichtheimia corymbifera JMRC:FSU:9682
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