STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LCOR_07653.1Duf887-domain-containing protein. (278 aa)    
Predicted Functional Partners:
LCOR_02512.1
Calpain-7; Belongs to the peptidase C2 family.
    
 
 0.630
LCOR_09872.1
Uncharacterized protein.
    
 
 0.603
LCOR_08069.1
Guanylate kinase-like domain-containing protein.
    
 
 0.601
LCOR_05331.1
Phosphatases ii.
   
   0.591
LCOR_03896.1
Uncharacterized protein.
    
 
 0.576
LCOR_09017.1
Phosphoglycolate phosphatase.
    
 
 0.567
LCOR_05057.1
Adenylate kinase; Belongs to the adenylate kinase family.
    
 
 0.558
ADK1
Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism. Adenylate kinase activity is critical for regulation of the phosphate utilization and the AMP de novo biosynthesis pathways.
    
 
 0.558
LCOR_10568.1
Probable fun34-transmembrane protein involved inammonia production.
    
   0.556
LCOR_10342.1
Protein.
    
   0.556
Your Current Organism:
Lichtheimia corymbifera
NCBI taxonomy Id: 1263082
Other names: L. corymbifera JMRC:FSU:9682, Lichtheimia corymbifera CBS 429.75, Lichtheimia corymbifera FSU 9682, Lichtheimia corymbifera JMRC:FSU:9682
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