STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LCOR_07838.1A-pheromone processing metallopeptidase ste23; Belongs to the peptidase M16 family. (1153 aa)    
Predicted Functional Partners:
LCOR_01765.1
Ubiquitin-40s ribosomal protein s31 fusionprotein.
    
  0.912
LCOR_03778.1
Polyubiquitin.
    
  0.831
LCOR_07745.1
Polyubiquitin.
    
  0.831
LCOR_00658.1
Ubiquitin-60s ribosomal protein l40 fusionprotein.
    
  0.829
LCOR_03922.1
RRN7-type domain-containing protein.
    
  0.829
LCOR_02373.1
V-type proton ATPase proteolipid subunit; Proton-conducting pore forming subunit of the membrane integral V0 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.
    
  0.822
LCOR_02008.1
Uncharacterized protein.
   
  0.761
LCOR_05425.1
Ubiquitin-like protein.
   
  0.761
LCOR_10533.1
Nedd8.
    
  0.756
LCOR_11705.1
Uv excision repair protein rad23.
    
  0.756
Your Current Organism:
Lichtheimia corymbifera
NCBI taxonomy Id: 1263082
Other names: L. corymbifera JMRC:FSU:9682, Lichtheimia corymbifera CBS 429.75, Lichtheimia corymbifera FSU 9682, Lichtheimia corymbifera JMRC:FSU:9682
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.