STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LCOR_08534.1Peroxisomal biogenesis factor. (233 aa)    
Predicted Functional Partners:
LCOR_06604.1
Pex19-domain-containing protein.
   
 0.976
LCOR_11240.1
Peroxisomal membrane anchor protein.
    
 0.909
LCOR_01530.1
Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.
   
 0.898
LCOR_00072.1
Peroxin 13.
   
 0.891
LCOR_05461.1
Peroxisomal docking factor component pex13.
   
 0.891
LCOR_08051.1
Peroxin 3.
   
 0.876
LCOR_03615.1
Pex14_N domain-containing protein.
    
 0.846
LCOR_02031.1
Mitochondrial fission 1 protein; Has a role in mitochondrial fission.
    
 0.802
LCOR_09073.1
Mitochondrial fission 1 protein; Has a role in mitochondrial fission.
    
 0.802
LCOR_11472.1
Peroxisomal membrane protein PEX16.
   
 
 0.796
Your Current Organism:
Lichtheimia corymbifera
NCBI taxonomy Id: 1263082
Other names: L. corymbifera JMRC:FSU:9682, Lichtheimia corymbifera CBS 429.75, Lichtheimia corymbifera FSU 9682, Lichtheimia corymbifera JMRC:FSU:9682
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