STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LCOR_09138.1SUN domain-containing protein. (512 aa)    
Predicted Functional Partners:
LCOR_01881.1
Serine/threonine-protein kinase.
   
 
 0.693
LCOR_11028.1
Uncharacterized protein.
    
 
 0.661
LCOR_01001.1
Histone H2A; Belongs to the histone H2A family.
    
 
 0.648
LCOR_02733.1
Uncharacterized protein.
   
 
 0.594
LCOR_03042.1
Uncharacterized protein.
    
 
 0.570
LCOR_09581.1
Short-chain dehydrogenase reductase sdr; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
    
 
 0.549
LCOR_10915.1
Short chain dehydrogenase.
    
 
 0.549
LCOR_11241.1
Serine 3-dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
    
 
 0.549
LCOR_00886.1
Ima1_N domain-containing protein.
    
 
 0.544
LCOR_01701.1
Nucleoporin pom152.
    
 
 0.515
Your Current Organism:
Lichtheimia corymbifera
NCBI taxonomy Id: 1263082
Other names: L. corymbifera JMRC:FSU:9682, Lichtheimia corymbifera CBS 429.75, Lichtheimia corymbifera FSU 9682, Lichtheimia corymbifera JMRC:FSU:9682
Server load: low (22%) [HD]