STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LCOR_09428.1Uncharacterized protein. (559 aa)    
Predicted Functional Partners:
LCOR_07810.1
Wd40 repeat-like protein.
    
 0.716
LCOR_01765.1
Ubiquitin-40s ribosomal protein s31 fusionprotein.
    
 0.680
LCOR_03896.1
Uncharacterized protein.
    
 0.644
LCOR_07335.1
Transcription initiation factor tfiid subunit 5.
    
 0.623
LCOR_06692.1
Uncharacterized protein.
    
 0.605
LCOR_06262.1
Histone h2a deubiquitinase mysm1.
    
 
 0.604
LCOR_03255.1
POT1PC domain-containing protein.
    
  0.602
LCOR_03254.1
Uncharacterized protein.
    
  0.602
LCOR_06847.1
Transcription initiation factor tfiid subunit12.
    
 0.597
LCOR_04936.1
Histone acetylase complex subunit; Belongs to the PI3/PI4-kinase family.
    
  0.595
Your Current Organism:
Lichtheimia corymbifera
NCBI taxonomy Id: 1263082
Other names: L. corymbifera JMRC:FSU:9682, Lichtheimia corymbifera CBS 429.75, Lichtheimia corymbifera FSU 9682, Lichtheimia corymbifera JMRC:FSU:9682
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.