STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LCOR_09838.1Vacuolar fusion protein ccz1 homolog. (556 aa)    
Predicted Functional Partners:
LCOR_04766.1
Vacuolar fusion protein mon1 homolog a-like.
    
 0.982
LCOR_10307.1
Vacuolar fusion protein mon1 homolog a-like.
    
 0.982
LCOR_02378.1
Vacuolar protein sorting-associated protein 41; Required for vacuolar assembly and vacuolar traffic. Belongs to the VPS41 family.
    
 
 0.974
LCOR_04255.1
Vacuolar protein sorting-associated protein 33a; Belongs to the STXBP/unc-18/SEC1 family.
    
 
 0.974
LCOR_06334.1
E3 ubiquitin-protein ligase PEP5.
    
 
 0.974
LCOR_10728.1
Probable vacuolar protein sorting-associated protein 16 homolog; Essential for vacuolar protein sorting. Required for vacuole biogenesis, stability and to maintain vacuole morphology.
    
 
 0.974
LCOR_11478.1
Protein.
    
 
 0.974
LCOR_00553.1
Ras-related gtp-binding protein.
    
 0.969
LCOR_00639.1
Tgf beta receptor associated protein.
    
 
 0.950
LCOR_00948.1
Probable gtpase rab7 protein.
    
 0.949
Your Current Organism:
Lichtheimia corymbifera
NCBI taxonomy Id: 1263082
Other names: L. corymbifera JMRC:FSU:9682, Lichtheimia corymbifera CBS 429.75, Lichtheimia corymbifera FSU 9682, Lichtheimia corymbifera JMRC:FSU:9682
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