STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LCOR_09841.1Serine/threonine-protein phosphatase. (546 aa)    
Predicted Functional Partners:
LCOR_05632.1
Calcium calmodulin-dependent proteinphosphatase.
   
 0.986
LCOR_09011.1
Wd repeat-containing protein 92.
    
 0.969
LCOR_07780.1
Peptidylprolyl isomerase.
 
  
 0.947
LCOR_01127.1
Uncharacterized protein.
    
 
 0.889
LCOR_09123.1
Uncharacterized protein.
    
 
 0.889
LCOR_05432.1
Anaphase-promoting complex subunit 1.
    
 0.880
LCOR_01108.1
Myosin regulatory light chain cdc4.
    
 0.862
LCOR_07489.1
Myosin regulatory light chain cdc4.
    
 0.862
LCOR_07657.1
Calmodulin; Belongs to the calmodulin family.
 
  
 0.862
LCOR_10629.1
Calmodulin; Belongs to the calmodulin family.
 
  
 0.862
Your Current Organism:
Lichtheimia corymbifera
NCBI taxonomy Id: 1263082
Other names: L. corymbifera JMRC:FSU:9682, Lichtheimia corymbifera CBS 429.75, Lichtheimia corymbifera FSU 9682, Lichtheimia corymbifera JMRC:FSU:9682
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