STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LCOR_09452.1Homeobox domain-containing protein. (180 aa)    
Predicted Functional Partners:
LCOR_07263.1
Uncharacterized protein.
    
 0.823
LCOR_01758.1
Srf-tf-domain-containing partial.
    
 0.482
LCOR_06393.1
Srf-tf-domain-containing partial.
    
 0.482
LCOR_07433.1
Mads box transcription factor mcm1.
    
 0.482
LCOR_08527.1
Srf-tf-domain-containing partial.
    
 0.482
LCOR_08806.1
Srf-tf-domain-containing protein.
    
 0.482
LCOR_09108.1
Mads box transcription factor mcm1.
    
 0.482
LCOR_10278.1
Srf-tf-domain-containing partial.
    
 0.482
LCOR_12313.1
Mads box transcription factor mcm1.
    
 0.482
LCOR_00791.1
Thiamin pyrophosphokinase-related protein.
    
  0.473
Your Current Organism:
Lichtheimia corymbifera
NCBI taxonomy Id: 1263082
Other names: L. corymbifera JMRC:FSU:9682, Lichtheimia corymbifera CBS 429.75, Lichtheimia corymbifera FSU 9682, Lichtheimia corymbifera JMRC:FSU:9682
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.