STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LCOR_09195.1Cell division cycle 123 homolog ( cerevisiae). (360 aa)    
Predicted Functional Partners:
LCOR_11787.1
Eukaryotic translation initiation factor 2 gammasubunit.
    
 
 0.959
LCOR_00781.1
Eukaryotic translation initiation factor 2subunit beta.
    
 
 0.845
LCOR_09352.1
Translation initiation factor.
    
 
 0.845
LCOR_07488.1
Cop9 signalosome complex subunit 5a-like.
   
    0.703
LCOR_07068.1
Adp-sugar pyrophosphatase; Belongs to the Nudix hydrolase family.
   
  
 0.596
LCOR_04752.1
Translation initiation factor eif2 alphasubunit.
   
 
 0.594
LCOR_09194.1
Short-chain dehydrogenase.
 
 
   0.531
LCOR_03672.1
Nudix family.
   
  
 0.492
LCOR_00704.1
Cytoplasm protein.
   
 
 0.474
LCOR_00825.1
Smad fha domain-containing protein.
   
 
 0.474
Your Current Organism:
Lichtheimia corymbifera
NCBI taxonomy Id: 1263082
Other names: L. corymbifera JMRC:FSU:9682, Lichtheimia corymbifera CBS 429.75, Lichtheimia corymbifera FSU 9682, Lichtheimia corymbifera JMRC:FSU:9682
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