STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LCOR_09858.1Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family. (428 aa)    
Predicted Functional Partners:
LCOR_06692.1
Uncharacterized protein.
    
 0.627
LCOR_03896.1
Uncharacterized protein.
    
 0.545
LCOR_01508.1
Reticulon-like protein.
    
  0.529
LCOR_04123.1
Reticulon-like protein.
    
  0.529
LCOR_00619.1
Aspartic protease; Belongs to the peptidase A1 family.
  
     0.525
LCOR_07312.1
Achain rmp-pepstatin a complex; Belongs to the peptidase A1 family.
  
     0.523
LCOR_09519.1
Belongs to the peptidase A1 family.
  
     0.518
LCOR_09516.1
Belongs to the peptidase A1 family.
  
     0.517
LCOR_09727.1
Belongs to the peptidase A1 family.
  
     0.513
LCOR_03667.1
Belongs to the peptidase A1 family.
  
     0.511
Your Current Organism:
Lichtheimia corymbifera
NCBI taxonomy Id: 1263082
Other names: L. corymbifera JMRC:FSU:9682, Lichtheimia corymbifera CBS 429.75, Lichtheimia corymbifera FSU 9682, Lichtheimia corymbifera JMRC:FSU:9682
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