STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LCOR_10300.1Ran gtpase activator. (402 aa)    
Predicted Functional Partners:
LCOR_09843.1
Ubiquitin-conjugating enzyme 9; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.998
LCOR_02015.1
Ran-specific gtpase-activating protein 1.
 
 
 0.997
LCOR_03846.1
Uncharacterized protein.
   
 0.989
LCOR_10772.1
Uncharacterized protein.
   
 0.989
LCOR_00659.1
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
   
 0.984
LCOR_02374.1
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
   
 0.984
LCOR_01521.1
Ubiquitin-like protein.
    
 0.971
LCOR_08891.1
RanBD1 domain-containing protein.
   
 0.971
LCOR_10717.1
Ubiquitin-like protein smt3.
    
 0.971
LCOR_12335.1
GRIP domain-containing protein.
   
 0.971
Your Current Organism:
Lichtheimia corymbifera
NCBI taxonomy Id: 1263082
Other names: L. corymbifera JMRC:FSU:9682, Lichtheimia corymbifera CBS 429.75, Lichtheimia corymbifera FSU 9682, Lichtheimia corymbifera JMRC:FSU:9682
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