STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LCOR_10007.1Rho guanyl nucleotide exchange factor. (1051 aa)    
Predicted Functional Partners:
LCOR_04951.1
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
   
  0.705
LCOR_09246.1
Ap-2 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family.
    
  0.695
LCOR_00133.1
DH domain-containing protein.
    
  0.652
LCOR_05410.1
Rho guanyl-nucleotide exchange factor.
    
 
0.652
LCOR_04094.1
Adaptin ear-binding coat-associated protein 1necap-1.
    
 0.643
LCOR_06285.1
AP complex subunit beta; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration.
    
  0.622
LCOR_05458.1
Adaptor protein complex beta subunit.
    
  0.622
LCOR_00511.1
Uncharacterized protein.
    
 0.616
LCOR_02558.1
Uncharacterized protein.
    
 0.616
LCOR_10083.1
Related to neural wiskott-aldrich syndromeprotein.
    
 0.616
Your Current Organism:
Lichtheimia corymbifera
NCBI taxonomy Id: 1263082
Other names: L. corymbifera JMRC:FSU:9682, Lichtheimia corymbifera CBS 429.75, Lichtheimia corymbifera FSU 9682, Lichtheimia corymbifera JMRC:FSU:9682
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.