STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LCOR_10027.160s ribosomal protein l17 l23; Belongs to the universal ribosomal protein uL22 family. (182 aa)    
Predicted Functional Partners:
LCOR_00481.1
60s ribosomal protein l3; Belongs to the universal ribosomal protein uL3 family.
  
 0.999
LCOR_01765.1
Ubiquitin-40s ribosomal protein s31 fusionprotein.
   
 0.999
LCOR_01636.1
40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.
  
 0.999
LCOR_01183.1
40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.
   
 
 0.999
LCOR_02310.1
60s ribosomal protein l27a; Belongs to the universal ribosomal protein uL15 family.
  
 0.999
LCOR_02665.1
60s ribosomal protein l12; Belongs to the universal ribosomal protein uL11 family.
  
 0.999
LCOR_02906.1
Coproporphyrinogen iii oxidase.
  
 
 0.999
LCOR_00869.1
60s ribosomal protein l37a.
   
 
 0.999
LCOR_03652.1
Ribosomal protein l28e.
   
 0.999
LCOR_03684.1
40s ribosomal protein s13; Belongs to the universal ribosomal protein uS15 family.
  
 
 0.999
Your Current Organism:
Lichtheimia corymbifera
NCBI taxonomy Id: 1263082
Other names: L. corymbifera JMRC:FSU:9682, Lichtheimia corymbifera CBS 429.75, Lichtheimia corymbifera FSU 9682, Lichtheimia corymbifera JMRC:FSU:9682
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.