STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LCOR_10114.1Multidrug resistance protein 1. (526 aa)    
Predicted Functional Partners:
LCOR_11575.1
NDK domain-containing protein.
  
 0.651
LCOR_05301.1
Iron-sulfur clusters transporter atm1.
    
0.629
LCOR_06254.1
E3 ubiquitin-protein ligase rnf185-like.
    
  0.625
LCOR_09246.1
Ap-2 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family.
    
  0.619
LCOR_06799.1
Probable qcr2-40 kDa ubiquinol cytochrome-creductase core protein 2.
   
 0.605
LCOR_04259.1
TAF4 domain-containing protein.
    
 0.601
LCOR_08096.1
26s protease regulatory subunit 7; Belongs to the AAA ATPase family.
   
 0.601
LCOR_00702.1
Anth-domain-containing protein.
    
 0.599
LCOR_03064.1
Cytoskeleton assembly control protein.
    
 0.599
LCOR_03764.1
26S proteasome regulatory subunit RPN1; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.
    
  0.590
Your Current Organism:
Lichtheimia corymbifera
NCBI taxonomy Id: 1263082
Other names: L. corymbifera JMRC:FSU:9682, Lichtheimia corymbifera CBS 429.75, Lichtheimia corymbifera FSU 9682, Lichtheimia corymbifera JMRC:FSU:9682
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