STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LCOR_10720.1Bifunctional polynucleotide phosphatase kinase-like. (404 aa)    
Predicted Functional Partners:
LCOR_08869.1
Histidine biosynthesis trifunctional protein.
  
 
 0.988
LCOR_11043.1
Imidazole glycerol phosphate synthase hisHF; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The glutaminase domain produces the ammonia necessary for the cyclase domain to produce IGP and AICAR from PRFAR. The ammonia is channeled to the active site of the cyclase domain. Belongs to the HisA/HisF family.
  
 
 0.946
LCOR_01030.1
Histidinol-phosphate aminotransferase.
  
 
 0.924
LCOR_10808.1
Histidinol-phosphate aminotransferase.
  
 
 0.924
LCOR_02634.1
DNA polymerase; DNA polymerase that functions in several pathways of DNA repair. Involved in base excision repair (BER) responsible for repair of lesions that give rise to abasic (AP) sites in DNA. Also contributes to DNA double-strand break repair by non-homologous end joining and homologous recombination. Has both template-dependent and template- independent (terminal transferase) DNA polymerase activities. Has also a 5'-deoxyribose-5-phosphate lyase (dRP lyase) activity.
    
 0.921
LCOR_11378.1
Probable rad16-nucleotide excision repairprotein.
  
 
 0.895
LCOR_03923.1
Dna ligase 4; Belongs to the ATP-dependent DNA ligase family.
   
 0.882
LCOR_11539.1
Dna polymerase mu; Belongs to the DNA polymerase type-X family.
    
 0.841
LCOR_02788.1
DNA ligase.
   
 0.829
LCOR_06937.1
DNA ligase.
   
 0.829
Your Current Organism:
Lichtheimia corymbifera
NCBI taxonomy Id: 1263082
Other names: L. corymbifera JMRC:FSU:9682, Lichtheimia corymbifera CBS 429.75, Lichtheimia corymbifera FSU 9682, Lichtheimia corymbifera JMRC:FSU:9682
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