STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LCOR_10384.1Ubc-like protein. (253 aa)    
Predicted Functional Partners:
LCOR_09491.1
Ubiquitin-conjugating enzyme e2 g2; Belongs to the ubiquitin-conjugating enzyme family.
    
0.970
LCOR_02824.1
Ubiquitin-like modifier-activating enzyme ATG7; E1-like activating enzyme involved in the 2 ubiquitin-like systems required for cytoplasm to vacuole transport (Cvt) and autophagy. Activates ATG12 for its conjugation with ATG5 and ATG8 for its conjugation with phosphatidylethanolamine. Both systems are needed for the ATG8 association to Cvt vesicles and autophagosomes membranes. Autophagy is essential for maintenance of amino acid levels and protein synthesis under nitrogen starvation. Required for selective autophagic degradation of the nucleus (nucleophagy) as well as for mitophagy wh [...]
    
 0.906
LCOR_04094.1
Adaptin ear-binding coat-associated protein 1necap-1.
 
    
 0.906
LCOR_08354.1
Ring finger membrane protein.
    
 
 0.903
LCOR_01485.1
Cytochrome c heme lyase; Links covalently the heme group to the apoprotein of cytochrome c.
 
      0.899
LCOR_07077.1
Poly rna transport protein; Belongs to the ubiquitin-activating E1 family.
    
 0.895
LCOR_04390.1
NEDD8-activating enzyme E1 regulatory subunit; Regulatory subunit of the dimeric UBA3-ULA1 E1 enzyme.
 
  
 0.872
LCOR_07076.1
Nedd8 activating enzyme.
   
 0.862
LCOR_00576.1
UBIQUITIN_CONJUGAT_2 domain-containing protein.
    
 0.859
LCOR_05311.1
Ubiquitin-conjugating enzyme e2 s-like; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.847
Your Current Organism:
Lichtheimia corymbifera
NCBI taxonomy Id: 1263082
Other names: L. corymbifera JMRC:FSU:9682, Lichtheimia corymbifera CBS 429.75, Lichtheimia corymbifera FSU 9682, Lichtheimia corymbifera JMRC:FSU:9682
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