STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LCOR_09738.1Sulfate transporter. (769 aa)    
Predicted Functional Partners:
LCOR_11344.1
Nadh dehydrogenase subunit 4.
  
 
 0.647
LCOR_00938.1
Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in the mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). Belongs to the GatB/GatE family. GatB subfamily.
    
  0.641
LCOR_08196.1
Arm repeat-containing protein.
  
 
 0.615
LCOR_08230.1
Uncharacterized protein; Belongs to the complex I LYR family.
    
 
 0.605
LCOR_11346.1
Cytochrome b.
    
 
 0.603
LCOR_10733.1
Double-strand break repair protein mus-23; Belongs to the MRE11/RAD32 family.
  
   0.594
LCOR_04798.1
Gtp-binding protein ypt1.
   
   0.577
LCOR_06253.1
Rab-like protein 6.
   
   0.577
LCOR_06252.1
Uncharacterized protein.
   
   0.577
LCOR_08133.1
Gtp-binding protein ypt1.
   
   0.577
Your Current Organism:
Lichtheimia corymbifera
NCBI taxonomy Id: 1263082
Other names: L. corymbifera JMRC:FSU:9682, Lichtheimia corymbifera CBS 429.75, Lichtheimia corymbifera FSU 9682, Lichtheimia corymbifera JMRC:FSU:9682
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