STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LCOR_10735.1Cullin-4b; Belongs to the cullin family. (1027 aa)    
Predicted Functional Partners:
LCOR_01828.1
Ring-box protein 1.
    
 0.960
LCOR_08462.1
Denticleless protein homolog.
    
 0.949
LCOR_04891.1
Dna damage-binding protein 1a.
   
 0.948
LCOR_05813.1
Dna damage-binding protein 1a.
   
 0.948
LCOR_12185.1
Excision repair cross-complementing rodentrepair complementation group 8.
    
 0.917
LCOR_04357.1
Cullin-associated nedd8-dissociated protein 2isoform 1.
   
 0.912
LCOR_07488.1
Cop9 signalosome complex subunit 5a-like.
    
 0.901
LCOR_10533.1
Nedd8.
    
 0.889
LCOR_03397.1
Cop9 signalosome complex subunit 6-like.
    
 0.882
LCOR_11694.1
Wd repeat-containing protein.
    
 0.880
Your Current Organism:
Lichtheimia corymbifera
NCBI taxonomy Id: 1263082
Other names: L. corymbifera JMRC:FSU:9682, Lichtheimia corymbifera CBS 429.75, Lichtheimia corymbifera FSU 9682, Lichtheimia corymbifera JMRC:FSU:9682
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