STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LCOR_11212.1Upf0047 protein yjbq. (141 aa)    
Predicted Functional Partners:
LCOR_02918.1
Hexaprenyl pyrophosphate synthetase; Belongs to the FPP/GGPP synthase family.
    
 0.757
LCOR_00769.1
Uncharacterized protein.
    
  0.737
LCOR_06151.1
Alkyl transferase; Belongs to the UPP synthase family.
    
  0.737
LCOR_07346.1
Farnesyl pyrophosphate synthase; Belongs to the FPP/GGPP synthase family.
    
 0.726
LCOR_08212.1
Squalene synthetase.
     
 0.717
LCOR_04969.1
Thiamin biosynthesis protein (Thi-4).
   
 
 0.689
LCOR_07817.1
Uncharacterized protein.
   
 
 0.689
LCOR_09906.1
Solanesyl diphosphate synthase; Belongs to the FPP/GGPP synthase family.
    
 0.655
LCOR_04646.1
Geranylgeranyl pyrophosphate synthetase; Belongs to the FPP/GGPP synthase family.
    
 0.626
LCOR_06403.1
Geranylgeranyl pyrophosphate synthase; Belongs to the FPP/GGPP synthase family.
    
 0.626
Your Current Organism:
Lichtheimia corymbifera
NCBI taxonomy Id: 1263082
Other names: L. corymbifera JMRC:FSU:9682, Lichtheimia corymbifera CBS 429.75, Lichtheimia corymbifera FSU 9682, Lichtheimia corymbifera JMRC:FSU:9682
Server load: low (18%) [HD]