STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LCOR_10703.1Uncharacterized protein. (1019 aa)    
Predicted Functional Partners:
LCOR_06248.1
Kaptin.
    
 0.992
LCOR_04441.1
Vacuolar membrane-associated protein iml1.
    
 0.991
LCOR_03005.1
Nitrogen permease regulator 2.
   
 0.989
LCOR_05415.1
Wd repeat-containing protein 24.
    
 0.988
LCOR_03539.1
Wd repeat protein.
    
 0.987
LCOR_07010.1
Upf0536 protein c12orf66 homolog.
    
 0.984
LCOR_08046.1
Signal peptidase complex subunit 2 homolog.
   
 0.955
LCOR_09196.1
Uncharacterized protein.
   
 0.944
LCOR_10963.1
Signal peptidase subunit 3.
    
 0.942
LCOR_10448.1
Nitrogen permease regulator 3-like protein.
   
 0.802
Your Current Organism:
Lichtheimia corymbifera
NCBI taxonomy Id: 1263082
Other names: L. corymbifera JMRC:FSU:9682, Lichtheimia corymbifera CBS 429.75, Lichtheimia corymbifera FSU 9682, Lichtheimia corymbifera JMRC:FSU:9682
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.