STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LCOR_10811.1Uncharacterized protein. (258 aa)    
Predicted Functional Partners:
LCOR_04294.1
Exosome component 8.
    
  0.933
LCOR_03402.1
Uncharacterized protein.
    
 0.775
LCOR_03636.1
Protein kinase domain-containing protein.
    
 0.756
LCOR_11282.1
Dcp2-domain-containing protein.
   
 0.743
LCOR_00570.1
Uncharacterized protein.
   
 0.740
LCOR_08451.1
Uncharacterized protein.
   
 0.740
LCOR_00411.1
14-3-3 protein; Belongs to the 14-3-3 family.
   
  0.718
LCOR_03631.1
14-3-3 protein; Belongs to the 14-3-3 family.
   
  0.718
LCOR_04427.1
14-3-3 family protein; Belongs to the 14-3-3 family.
   
  0.718
LCOR_06124.1
14-3-3 protein; Belongs to the 14-3-3 family.
   
  0.718
Your Current Organism:
Lichtheimia corymbifera
NCBI taxonomy Id: 1263082
Other names: L. corymbifera JMRC:FSU:9682, Lichtheimia corymbifera CBS 429.75, Lichtheimia corymbifera FSU 9682, Lichtheimia corymbifera JMRC:FSU:9682
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.