STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GUF1Translation factor GUF1, mitochondrial; Promotes mitochondrial protein synthesis. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Binds to mitochondrial ribosomes in a GTP-dependent manner. (650 aa)    
Predicted Functional Partners:
LCOR_02906.1
Coproporphyrinogen iii oxidase.
 
 
 
 0.936
LCOR_03996.1
Uncharacterized protein.
  
 
 0.928
LCOR_11613.1
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
 
  
 0.927
LCOR_11867.1
40s ribosomal protein s9; Belongs to the universal ribosomal protein uS9 family.
  
 
 0.919
LCOR_05356.1
50s ribosomal protein l19.
  
   0.902
LCOR_06512.1
30s ribosomal protein s16.
  
 
 0.901
LCOR_05526.1
Uncharacterized protein.
   
 
 0.891
LCOR_03477.1
Ribosomal protein; Belongs to the universal ribosomal protein uL1 family.
   
 
 0.891
LCOR_07153.1
60s ribosomal protein l16; Belongs to the universal ribosomal protein uL13 family.
  
 
 0.889
LCOR_11381.1
50s ribosomal protein l13.
  
 
 0.889
Your Current Organism:
Lichtheimia corymbifera
NCBI taxonomy Id: 1263082
Other names: L. corymbifera JMRC:FSU:9682, Lichtheimia corymbifera CBS 429.75, Lichtheimia corymbifera FSU 9682, Lichtheimia corymbifera JMRC:FSU:9682
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.