STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LCOR_11333.1Protoplast secreted protein 2. (210 aa)    
Predicted Functional Partners:
LCOR_09447.1
Riboflavin kinase.
    
  0.658
LCOR_02505.1
Argininosuccinate synthetase.
  
 
 0.555
LCOR_04730.1
Argininosuccinate lyase.
    
 0.543
LCOR_05235.1
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
  
  
 0.418
LCOR_06918.1
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
  
  
 0.418
LCOR_11280.1
Catalase; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide.
  
  
 0.418
LCOR_03049.1
Siroheme synthase.
    
 0.409
LCOR_11346.1
Cytochrome b.
     
 0.400
Your Current Organism:
Lichtheimia corymbifera
NCBI taxonomy Id: 1263082
Other names: L. corymbifera JMRC:FSU:9682, Lichtheimia corymbifera CBS 429.75, Lichtheimia corymbifera FSU 9682, Lichtheimia corymbifera JMRC:FSU:9682
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.