STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LCOR_11382.1Arm repeat-containing protein. (795 aa)    
Predicted Functional Partners:
LCOR_01032.1
Pre-mrna-processing protein 45.
    
  0.644
LCOR_02550.1
Cell cycle control protein.
    
  0.619
LCOR_06338.1
Pre-mrna-splicing factor rbm22.
     
 0.606
LCOR_04933.1
Caf1 family protein.
    
 
 0.599
LCOR_05508.1
Ccr4-not transcription complex subunit 7.
    
 
 0.599
LCOR_06887.1
Atp-dependent rna helicase dhh1; Belongs to the DEAD box helicase family.
    
 
 0.557
LCOR_09435.1
Atp-dependent rna helicase dhh1; Belongs to the DEAD box helicase family.
    
 
 0.557
LCOR_05118.1
Related to ccr4-transcriptional regulatorinvolved in carbon catabolite repression.
    
 
 0.543
LCOR_07029.1
Related to ccr4-transcriptional regulatorinvolved in carbon catabolite repression.
    
 
 0.543
LCOR_03066.1
Pumilio domain-containing protein kiaa0020homolog.
    
 
0.483
Your Current Organism:
Lichtheimia corymbifera
NCBI taxonomy Id: 1263082
Other names: L. corymbifera JMRC:FSU:9682, Lichtheimia corymbifera CBS 429.75, Lichtheimia corymbifera FSU 9682, Lichtheimia corymbifera JMRC:FSU:9682
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