STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LCOR_11574.1Urea transporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (659 aa)    
Predicted Functional Partners:
LCOR_06645.1
Proline dehydrogenase; Converts proline to delta-1-pyrroline-5-carboxylate.
  
  
 0.926
LCOR_07361.1
Proline dehydrogenase; Converts proline to delta-1-pyrroline-5-carboxylate.
  
  
 0.926
LCOR_06579.1
Choline transporter-like protein; Belongs to the CTL (choline transporter-like) family.
     
 0.775
LCOR_01206.1
Adenine phosphoribosyltransferase.
   
  
 0.735
LCOR_01548.1
Adenine phosphoribosyltransferase.
   
  
 0.735
LCOR_11470.1
Acetoacetyl-synthetase.
 
  
 0.730
LCOR_09314.1
Magnesium-dependent phosphatase.
   
    0.687
LCOR_00770.1
Zn(2)-C6 fungal-type domain-containing protein.
    
 0.684
LCOR_05470.1
Zn(2)-C6 fungal-type domain-containing protein.
    
 0.684
LCOR_00603.1
Amino acid transporter.
  
  
 0.624
Your Current Organism:
Lichtheimia corymbifera
NCBI taxonomy Id: 1263082
Other names: L. corymbifera JMRC:FSU:9682, Lichtheimia corymbifera CBS 429.75, Lichtheimia corymbifera FSU 9682, Lichtheimia corymbifera JMRC:FSU:9682
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