STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LCOR_12141.1DDE_Tnp_IS1595 domain-containing protein. (270 aa)    
Predicted Functional Partners:
LCOR_01075.1
Dna mismatch repair protein msh6; Component of the post-replicative DNA mismatch repair system (MMR).
  
 0.899
LCOR_01063.1
Dna mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).
  
 0.875
LCOR_10364.1
Dna mismatch repair protein.
  
 0.875
LCOR_01202.1
Dna mismatch repair protein msh3; Component of the post-replicative DNA mismatch repair system (MMR).
  
 0.845
LCOR_06315.1
Muts protein homolog 4.
  
 0.845
LCOR_09754.1
Mismatch repair protein 5.
  
 0.844
LCOR_03647.1
Vezatin domain-containing protein.
   
 0.772
LCOR_11115.1
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.772
LCOR_10571.1
Vezatin domain-containing protein.
   
 0.772
LCOR_05143.1
Low quality protein: fanconi anemia group jprotein.
   
 0.739
Your Current Organism:
Lichtheimia corymbifera
NCBI taxonomy Id: 1263082
Other names: L. corymbifera JMRC:FSU:9682, Lichtheimia corymbifera CBS 429.75, Lichtheimia corymbifera FSU 9682, Lichtheimia corymbifera JMRC:FSU:9682
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.