STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LCOR_11724.1Related to ppn1-vacuolar endopolyphosphatase. (565 aa)    
Predicted Functional Partners:
LCOR_06175.1
Sphingomyelinase c.
     
 0.652
LCOR_10219.1
Glycosyltransferase family 21 protein.
     
 0.637
LCOR_06304.1
Longevity-assurance protein.
     
 0.634
LCOR_07750.1
PAP2_C domain-containing protein.
     
 0.633
LCOR_07834.1
Sphingosine kinase.
    
 0.620
LCOR_08520.1
DAGKc domain-containing protein.
    
 0.606
LCOR_01486.1
Fatty acid desaturase.
     
 0.593
LCOR_02980.1
Pap2 domain protein.
     
 0.580
LCOR_08899.1
PAP2_C domain-containing protein.
     
 0.577
LCOR_00552.1
Neutral ceramidase.
     
 0.565
Your Current Organism:
Lichtheimia corymbifera
NCBI taxonomy Id: 1263082
Other names: L. corymbifera JMRC:FSU:9682, Lichtheimia corymbifera CBS 429.75, Lichtheimia corymbifera FSU 9682, Lichtheimia corymbifera JMRC:FSU:9682
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.