STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LCOR_11817.1Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine; Belongs to the GcvT family. (405 aa)    
Predicted Functional Partners:
LCOR_02513.1
Glycine cleavage system H protein; The H protein shuttles the methylamine group of glycine from the P protein to the T protein; Belongs to the GcvH family.
 
 0.999
LCOR_07580.1
Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.
 0.999
LCOR_00567.1
Serine hydroxymethyltransferase.
 
 0.991
LCOR_11826.1
Methylenetetrahydrofolate dehydrogenase.
  
 
 0.982
LCOR_04488.1
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
 
 0.980
LCOR_02931.1
Class v.
  
 
 0.895
LCOR_06717.1
Dihydrolipoyl dehydrogenase.
  
 0.892
LCOR_05208.1
-domain-containing protein.
  
 
 0.883
LCOR_05816.1
Aminoimidazole ribonucleotide synthetase.
  
 
 0.883
LCOR_08632.1
Fthfs-domain-containing protein.
  
 0.881
Your Current Organism:
Lichtheimia corymbifera
NCBI taxonomy Id: 1263082
Other names: L. corymbifera JMRC:FSU:9682, Lichtheimia corymbifera CBS 429.75, Lichtheimia corymbifera FSU 9682, Lichtheimia corymbifera JMRC:FSU:9682
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