STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KJQ53961.1Putative hydrolase. (197 aa)    
Predicted Functional Partners:
KJQ53962.1
Permease for cytosine/purine, uracil, thiamine, allantoin; Belongs to the purine-cytosine permease (2.A.39) family.
 
     0.952
apeB
Putative M18 family aminopeptidase 2.
  
    0.671
pucI
Putative allantoin permease; Belongs to the purine-cytosine permease (2.A.39) family.
 
     0.557
trpE
Anthranilate synthase component 1.
 
  
  0.533
omcB
Large cysteine-rich periplasmic protein OmcB.
       0.443
KJQ53633.1
Permease for cytosine/purine, uracil, thiamine, allantoin; Belongs to the purine-cytosine permease (2.A.39) family.
 
     0.434
qcrC
Menaquinol-cytochrome c reductase cytochrome c subunit.
  
  
  0.430
Your Current Organism:
Microbacterium sp. SA39
NCBI taxonomy Id: 1263625
Other names: M. sp. SA39
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.