STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F543_5880Uncharacterized protein of Mannheimia haemolytica serotype A2 str. BOVINE UniRef RepID=E2P5W7_PASHA. (128 aa)    
Predicted Functional Partners:
F543_5840
Mu-like prophage tail sheath protein gpL COG4386; Mu-like prophage FluMu tail sheath protein of Gammaproteobacteria UniRef RepID=VPL_HAEIN.
       0.773
F543_5850
Mu-like prophage FluMu protein gp38 of Pasteurellaceae UniRef RepID=VG38_HAEIN.
       0.773
F543_5860
Mu-like prophage FluMu protein gp37 of Pasteurellaceae UniRef RepID=VG37_HAEIN.
       0.773
F543_5870
Mu-like prophage protein gp36 COG4387; Mu-like prophage FluMu protein gp36 of Pasteurellaceae UniRef RepID=VG36_HAEIN.
       0.773
F543_5890
Mu-like prophage major head subunit gpT COG4397; Mu-like prophage FluMu major head subunit of Pasteurellaceae UniRef RepID=VPT_HAEIN.
       0.559
F543_5900
Mu-like prophage I protein COG4388; Mu-like prophage FluMu I protein of Gammaproteobacteria UniRef RepID=VPI_HAEIN.
       0.559
F543_5820
Mu-like prophage FluMu protein gp41 of Pasteurellaceae UniRef RepID=VG41_HAEIN.
       0.421
F543_5830
Mu-like prophage FluMu tail tube protein of Pasteurellaceae UniRef RepID=VPM_HAEIN.
       0.421
Your Current Organism:
Bibersteinia trehalosi
NCBI taxonomy Id: 1263831
Other names: B. trehalosi USDA-ARS-USMARC-189, Bibersteinia trehalosi USDA-ARS-USMARC-189
Server load: low (22%) [HD]