STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EMI25929.1ABC transporter membrane fusion protein, DevB type. (421 aa)    
Predicted Functional Partners:
EMI25930.1
DevC protein.
 
 
  0.967
EMI25928.1
ABC transporter ATP-binding subunit, DevA type.
 
 0.870
EMI26082.1
DevC protein.
 
 
  0.852
EMI28260.1
Membrane protein containing SNARE domain protein.
  
     0.709
EMI28138.1
Hypothetical protein.
  
     0.695
EMI25163.1
Extracellular nuclease.
  
     0.690
EMI23647.1
Secreted protein containing EF hand domain protein.
  
     0.688
EMI27152.1
C-type lectin.
  
 
  0.686
EMI29412.1
Protein containing Rho termination factor.
  
     0.679
EMI28642.1
Hypothetical protein.
  
  0.679
Your Current Organism:
Rhodopirellula europaea
NCBI taxonomy Id: 1263868
Other names: R. europaea SH398, Rhodopirellula europaea SH398
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.