STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFW11256.1Surface polysaccharide O-acyltransferase, integral membrane enzyme. (348 aa)    
Predicted Functional Partners:
SFW11264.1
Hypothetical protein.
       0.773
SFW11269.1
Transglutaminase-like superfamily protein.
       0.732
SFW11250.1
GNAT acetyltransferase.
       0.566
SFW11274.1
Hypothetical protein.
       0.470
SFW11280.1
RNA polymerase sigma-70 factor, ECF subfamily.
       0.470
SFW45447.1
Enterochelin esterase; Partial gene; manually curated; Belongs to the glycosyl hydrolase 11 (cellulase G) family.
  
     0.425
SFW11246.1
Hypothetical protein.
       0.419
SFW45787.1
Enterochelin esterase.
  
     0.408
Your Current Organism:
Ruminococcus flavefaciens
NCBI taxonomy Id: 1265
Other names: ATCC 19208, R. flavefaciens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.