STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFW14176.18-oxo-dGTP pyrophosphatase MutT, NUDIX family. (171 aa)    
Predicted Functional Partners:
SFW19263.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
 
  0.798
SFW40646.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
    
  0.781
SFW29410.1
5-methyltetrahydrofolate--homocysteine methyltransferase.
 
  
 0.775
SFW43050.1
Nicotinamide-nucleotide amidase; Belongs to the CinA family.
    
  0.774
SFW14192.1
Site-specific recombinase XerD; Belongs to the 'phage' integrase family.
       0.773
SFW21116.1
Probable phosphoglycerate mutase.
  
     0.546
SFW14202.1
Asparagine synthase (glutamine-hydrolysing).
       0.527
SFW14219.1
Hypothetical protein.
       0.504
SFW40414.1
Diguanylate cyclase (GGDEF) domain-containing protein.
  
 
  0.475
SFW14160.1
Aquaporin Z; Belongs to the MIP/aquaporin (TC 1.A.8) family.
       0.470
Your Current Organism:
Ruminococcus flavefaciens
NCBI taxonomy Id: 1265
Other names: ATCC 19208, R. flavefaciens
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