STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFW21532.1NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. (257 aa)    
Predicted Functional Partners:
SFW37087.1
[acyl-carrier-protein] S-malonyltransferase.
 0.941
SFW33087.1
Glutamate synthase (ferredoxin).
     
 0.921
SFW37199.1
3-hydroxyacyl-[acyl-carrier-protein] dehydratase.
  
 0.920
SFW27891.1
Acetaldehyde dehydrogenase / alcohol dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 0.909
SFW40646.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
    
 0.884
SFW39718.1
3-oxoacyl-[acyl-carrier-protein] synthase II; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
 0.880
SFW37144.1
3-oxoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
 
 0.875
SFW34461.1
PTS system, fructose-specific IIC component.
  
 0.866
SFW21519.1
Biotin carboxylase.
  
 0.858
SFW19263.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
   
 0.847
Your Current Organism:
Ruminococcus flavefaciens
NCBI taxonomy Id: 1265
Other names: ATCC 19208, R. flavefaciens
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