STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFW32979.1Pyruvate ferredoxin oxidoreductase gamma subunit. (171 aa)    
Predicted Functional Partners:
SFW32989.1
Pyruvate ferredoxin oxidoreductase delta subunit.
 
 0.999
SFW32999.1
Pyruvate ferredoxin oxidoreductase alpha subunit.
 
 0.999
SFW33008.1
Pyruvate ferredoxin oxidoreductase beta subunit.
 
 0.999
SFW40646.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
 0.999
SFW37285.1
2-oxoglutarate ferredoxin oxidoreductase subunit beta.
  
 0.998
SFW37276.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
 
 0.997
SFW33419.1
NAD(P)-dependent iron-only hydrogenase diaphorase component flavoprotein.
  
 0.960
rnfB
Electron transport complex, RnfABCDGE type, B subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.
  
 0.946
SFW54572.1
Phosphate acetyltransferase.
    
 0.942
SFW11943.1
NADH-FMN oxidoreductase RutF, flavin reductase (DIM6/NTAB) family.
 
 
 0.938
Your Current Organism:
Ruminococcus flavefaciens
NCBI taxonomy Id: 1265
Other names: ATCC 19208, R. flavefaciens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.