STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFW35153.1Putative esterase. (620 aa)    
Predicted Functional Partners:
SFW41375.1
Glycosyl hydrolase family 9.
  
 
   0.926
SFW34773.1
Arabinoxylan arabinofuranohydrolase; Belongs to the peptidase S11 family.
 
  
 0.838
SFW13356.1
Arabinan endo-1,5-alpha-L-arabinosidase.
 
  
 0.808
SFW11806.1
Carbohydrate binding module (family 6).
  
 
   0.792
SFW45447.1
Enterochelin esterase; Partial gene; manually curated; Belongs to the glycosyl hydrolase 11 (cellulase G) family.
 
 
  
0.777
SFW29627.1
Arabinoxylan arabinofuranohydrolase.
 
 
  
0.776
SFW45787.1
Enterochelin esterase.
 
 
  
0.776
SFW34987.1
Endo-1,4-beta-xylanase, GH35 family.
 
 
  
0.769
SFW45722.1
Enterochelin esterase.
 
 
  
0.762
SFW40331.1
Aryl-phospho-beta-D-glucosidase BglC, GH1 family.
 
  
 0.760
Your Current Organism:
Ruminococcus flavefaciens
NCBI taxonomy Id: 1265
Other names: ATCC 19208, R. flavefaciens
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