STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
zapEATPase, AFG1 family; Reduces the stability of FtsZ polymers in the presence of ATP. (365 aa)    
Predicted Functional Partners:
KGE03434.1
Succinate dehydrogenase iron-sulfur protein.
 
    0.665
KGE03433.1
Succinate dehydrogenase flavoprotein subunit; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.
 
    0.651
KGE03236.1
Hypothetical protein.
       0.570
KGE03344.1
YgfY; COG2938.
 
     0.512
KGE03431.1
Succinate dehydrogenase cytochrome b-556 subunit.
 
   
 0.480
rplM
LSU ribosomal protein L13p (L13Ae); This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.
  
    0.460
KGE03239.1
SSU ribosomal protein S9p (S16e); Belongs to the universal ribosomal protein uS9 family.
  
    0.451
Your Current Organism:
Pseudohaliea rubra
NCBI taxonomy Id: 1265313
Other names: Haliea rubra CM41_15a, Haliea rubra DSM 19751, P. rubra DSM 19751, Pseudohaliea rubra DSM 19751
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.