STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000378625_02507Unannotated protein. (296 aa)    
Predicted Functional Partners:
GCA_000378625_03463
Unannotated protein.
  
 
 0.931
GCA_000378625_03464
Unannotated protein.
 
  
 0.904
GCA_000378625_00318
Unannotated protein.
  
  
 0.863
GCA_000378625_02532
Unannotated protein.
  
 
 0.820
GCA_000378625_02508
Unannotated protein.
       0.800
GCA_000378625_02509
Unannotated protein.
   
   0.713
GCA_000378625_02510
Unannotated protein.
       0.670
GCA_000378625_01606
Unannotated protein.
    
 0.621
GCA_000378625_00110
Unannotated protein.
  
  
 0.602
GCA_000378625_03924
Unannotated protein.
  
     0.580
Your Current Organism:
Colwellia piezophila
NCBI taxonomy Id: 1265503
Other names: C. piezophila ATCC BAA-637, Colwellia piezophila ATCC BAA-637
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.