STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000378625_03559Unannotated protein. (378 aa)    
Predicted Functional Partners:
GCA_000378625_03560
Unannotated protein.
 
  0.995
GCA_000378625_02933
Unannotated protein.
  
  0.970
GCA_000378625_02801
Unannotated protein.
 
 0.944
GCA_000378625_01419
Unannotated protein.
  
  0.905
GCA_000378625_04337
Unannotated protein.
 
 0.858
GCA_000378625_00004
Unannotated protein.
 
 0.856
GCA_000378625_00449
Unannotated protein.
 
 0.852
GCA_000378625_04298
Unannotated protein.
  
 0.824
GCA_000378625_00973
Unannotated protein.
 
  0.817
GCA_000378625_02452
Unannotated protein.
 
  0.816
Your Current Organism:
Colwellia piezophila
NCBI taxonomy Id: 1265503
Other names: C. piezophila ATCC BAA-637, Colwellia piezophila ATCC BAA-637
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.