STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000381265_02901Unannotated protein. (456 aa)    
Predicted Functional Partners:
GCA_000381265_02902
Unannotated protein.
       0.637
GCA_000381265_02903
Unannotated protein.
       0.560
GCA_000381265_05194
Unannotated protein.
 
     0.541
GCA_000381265_05191
Unannotated protein.
 
     0.504
GCA_000381265_02900
Unannotated protein.
       0.485
GCA_000381265_02904
Unannotated protein.
  
    0.484
GCA_000381265_05190
Unannotated protein.
 
   
 0.443
GCA_000381265_05465
Unannotated protein.
  
     0.432
GCA_000381265_05192
Unannotated protein.
  
     0.401
GCA_000381265_05525
Unannotated protein.
   
 
 0.401
Your Current Organism:
Curvibacter lanceolatus
NCBI taxonomy Id: 1265504
Other names: C. lanceolatus ATCC 14669, Curvibacter lanceolatus ATCC 14669
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.