STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000381265_03953Unannotated protein. (357 aa)    
Predicted Functional Partners:
GCA_000381265_05526
Unannotated protein.
     
 0.953
GCA_000381265_02832
Unannotated protein.
 
 
 0.910
GCA_000381265_02797
Unannotated protein.
    
 0.895
GCA_000381265_03954
Unannotated protein.
       0.822
GCA_000381265_01644
Unannotated protein.
 
  
 0.808
GCA_000381265_01580
Unannotated protein.
 
      0.741
GCA_000381265_02427
Unannotated protein.
    
  0.740
GCA_000381265_05195
Unannotated protein.
    
  0.740
GCA_000381265_02342
Unannotated protein.
   
 0.733
GCA_000381265_03955
Unannotated protein.
       0.546
Your Current Organism:
Curvibacter lanceolatus
NCBI taxonomy Id: 1265504
Other names: C. lanceolatus ATCC 14669, Curvibacter lanceolatus ATCC 14669
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.